bbmap 38.86 95.88% Success

Executables

calcmem Failed a_sample_mt Succeeded addadapters Succeeded addssu Succeeded adjusthomopolymers Succeeded alltoall Succeeded analyzeaccession Succeeded analyzegenes Succeeded analyzesketchresults Succeeded applyvariants Succeeded bbcms Succeeded bbcountunique Succeeded bbduk Succeeded bbest Succeeded bbfakereads Succeeded bbmap Succeeded bbmapskimmer Succeeded bbmask Succeeded bbmerge_auto Failed bbmerge Succeeded bbnorm Succeeded bbsketch Succeeded bbrealign Succeeded bbrename Succeeded bbsplit Succeeded bbstats Succeeded bbsplitpairs Succeeded bbversion Failed bbwrap Failed bloomfilter Succeeded calctruequality Succeeded callgenes Succeeded callpeaks Succeeded callvariants Succeeded callvariants2 Succeeded clumpify Succeeded commonkmers Succeeded comparegff Succeeded comparesketch Succeeded comparessu Succeeded comparevcf Succeeded consect Succeeded consensus Succeeded countbarcodes Succeeded countgc Succeeded countsharedlines Succeeded crossblock Succeeded crosscontaminate Succeeded cutgff Succeeded cutprimers Succeeded decontaminate Succeeded dedupebymapping Succeeded dedupe2 Failed dedupe Succeeded demuxbyname Succeeded diskbench Succeeded estherfilter Succeeded explodetree Succeeded fetchproks Succeeded filterassemblysummary Succeeded filterbarcodes Succeeded filterbycoverage Succeeded filterbyname Succeeded filterbysequence Succeeded filterbytaxa Succeeded filterbytile Succeeded filterlines Succeeded filterqc Succeeded filtersam Succeeded filtersilva Succeeded filtersubs Succeeded filtervcf Succeeded fixgaps Succeeded fungalrelease Succeeded fuse Succeeded gbff2gff Succeeded getreads Succeeded gi2ancestors Succeeded gi2taxid Succeeded gitable Succeeded grademerge Succeeded gradesam Succeeded icecreamfinder Succeeded icecreamgrader Succeeded icecreammaker Succeeded idmatrix Succeeded idtree Succeeded invertkey Succeeded kapastats Succeeded kcompress Succeeded keepbestcopy Succeeded khist Succeeded kmercountexact Succeeded kmercountmulti Succeeded kmercoverage Succeeded kmerfilterset Succeeded kmerlimit Succeeded kmerlimit2 Succeeded kmerposition Succeeded lilypad Succeeded loadreads Succeeded loglog Succeeded makechimeras Succeeded makecontaminatedgenomes Succeeded makepolymers Succeeded mapPacBio Succeeded matrixtocolumns Succeeded mergeOTUs Succeeded mergebarcodes Succeeded mergepgm Succeeded mergeribo Succeeded mergesam Succeeded mergesketch Succeeded mergesorted Succeeded msa Succeeded mutate Succeeded muxbyname Succeeded partition Succeeded phylip2fasta Succeeded pileup Succeeded plotflowcell Succeeded plotgc Succeeded postfilter Succeeded printtime Succeeded processfrag Succeeded processhi_c Succeeded processspeed Succeeded randomgenome Succeeded randomreads Succeeded readlength Succeeded readqc Succeeded reducesilva Succeeded reformat Succeeded reformatpb Succeeded removebadbarcodes Succeeded removecatdogmousehuman Succeeded removehuman Succeeded removehuman2 Failed removemicrobes Succeeded removesmartbell Succeeded rename Succeeded renameimg Succeeded repair Succeeded replaceheaders Succeeded representative Succeeded rqcfilter Succeeded rqcfilter2 Succeeded samtoroc Succeeded seal Succeeded sendsketch Succeeded shred Succeeded shrinkaccession Succeeded shuffle Succeeded shuffle2 Succeeded sketch Succeeded sketchblacklist Succeeded sketchblacklist2 Succeeded sortbyname Succeeded splitbytaxa Succeeded splitnextera Succeeded splitribo Succeeded splitsam Succeeded splitsam4way Succeeded splitsam6way Succeeded stats Succeeded statswrapper Succeeded streamsam Succeeded subsketch Succeeded summarizecontam Succeeded summarizecoverage Failed summarizecrossblock Succeeded summarizemerge Succeeded summarizequast Failed summarizescafstats Succeeded summarizeseal Succeeded summarizesketch Succeeded synthmda Succeeded tadpipe Succeeded tadpole Succeeded tadwrapper Succeeded taxonomy Succeeded taxserver Succeeded taxsize Succeeded taxtree Succeeded testfilesystem Succeeded testformat Succeeded testformat2 Succeeded tetramerfreq Succeeded textfile Succeeded translate6frames Succeeded unicode2ascii Succeeded unzip Succeeded vcf2gff Succeeded webcheck Succeeded