bx-python 0.8.9 41.24% Success

Executables

aggregate_scores_in_intervals Succeeded maf_interval_alignibility Succeeded maf_print_chroms Succeeded int_seqs_to_char_strings Failed one_field_per_line Failed prefix_lines Failed tfloc_summary Failed aggregate_scores_in_intervals Succeeded align_print_template Failed axt_extract_ranges Succeeded axt_to_fasta Failed axt_to_lav Failed axt_to_maf Succeeded bed_bigwig_profile Failed bed_complement Succeeded bed_count_overlapping Failed bed_diff_basewise_summary Succeeded bed_coverage_by_interval Failed bed_coverage Failed bed_build_windows Failed bed_extend_to Failed bed_intersect Succeeded bed_count_by_interval Failed bed_intersect_basewise Succeeded bed_rand_intersect Failed bed_merge_overlapping Failed bed_subtract_basewise Succeeded bnMapper Succeeded div_snp_table_chr Succeeded find_in_sorted_file Failed gene_fourfold_sites Failed get_scores_in_intervals Succeeded interval_count_intersections Failed interval_join Failed lav_to_axt Succeeded lav_to_maf Succeeded line_select Failed lzop_build_offset_table Failed mMK_bitset Failed maf_build_index Succeeded maf_chop Failed maf_chunk Succeeded maf_col_counts Failed maf_col_counts_all Failed maf_count Succeeded maf_covered_ranges Succeeded maf_covered_regions Failed maf_div_sites Failed maf_drop_overlapping Succeeded maf_extract_chrom_ranges Succeeded maf_extract_ranges Succeeded maf_extract_ranges_indexed Succeeded maf_filter Failed maf_filter_max_wc Failed maf_gap_frequency Failed maf_gc_content Failed maf_interval_alignibility Succeeded maf_limit_to_species Failed maf_mapping_word_frequency Failed maf_mask_cpg Succeeded maf_mean_length_ungapped_piece Failed maf_percent_columns_matching Failed maf_percent_identity Failed maf_print_chroms Succeeded maf_print_scores Succeeded maf_randomize Failed maf_region_coverage_by_src Succeeded maf_select Failed maf_shuffle_columns Failed maf_species_in_all_files Failed maf_split_by_src Failed maf_thread_for_species Succeeded maf_tile Failed maf_tile_2 Failed maf_tile_2bit Failed maf_to_axt Failed maf_to_concat_fasta Failed maf_to_fasta Failed maf_to_int_seqs Failed maf_translate_chars Failed maf_truncate Failed maf_word_frequency Failed mask_quality Succeeded nib_chrom_intervals_to_fasta Succeeded nib_intervals_to_fasta Succeeded nib_length Failed out_to_chain Succeeded pretty_table Failed qv_to_bqv Succeeded random_lines Failed table_add_column Succeeded table_filter Succeeded ucsc_gene_table_to_intervals Succeeded wiggle_to_array_tree Failed wiggle_to_binned_array Succeeded wiggle_to_chr_binned_array Succeeded wiggle_to_simple Failed