mockinbird 1.0.0a1 98.13% Success

Executables

mb_adapter_clipper Succeeded mb_bam_postprocess Succeeded mb_bsfinder Succeeded mb_cap_occupancy Succeeded mb_filter_sites Succeeded mb_generate_negative_set Succeeded mb_naive_bsfinder Succeeded mb_plot_heatmap Succeeded mb_normalize Succeeded mb_plot_heatmap_small Succeeded mb_plot_kmer_enrichment Succeeded mb_plot_kmer_logodds Succeeded mb_plot_metagene Succeeded mb_plot_metagene_nobs Succeeded mb_plot_transition_frequencies Succeeded mb_preprocess Succeeded mb_postprocess Succeeded mb_remove_duplicates Succeeded mb_softclip_analyzer Succeeded mb_upgrade_table Succeeded mb_upgrade_table_table_file Succeeded mockinbird Succeeded mockinbird_flip_mate Succeeded mockinbird_postprocess Succeeded mockinbird_preprocess Succeeded mb_adapter_clipper_output_fastq Succeeded mb_adapter_clipper_input_fastq Succeeded mb_adapter_clipper_prime5_adapter Succeeded mb_adapter_clipper_prime3_adapter Succeeded mb_annotate_table Succeeded mb_bam_postprocess_input_bam_file Succeeded mb_bam_postprocess_output_bam_file Succeeded mb_bam_postprocess_output_directory Succeeded mb_bsfinder_outputfile Succeeded mb_bsfinder_inputfile Succeeded mb_calculate_posterior Failed mb_cap_occupancy_inputfile Succeeded mb_cap_occupancy_outputfile Succeeded mb_create_bam_statistics Succeeded mb_extract_sites Succeeded mb_filter_sites_filtered_file Succeeded mb_filter_sites_gff_file Succeeded mb_filter_sites_parclip_sites Succeeded mb_generate_negative_set_genome Succeeded mb_generate_negative_set_gff Succeeded mb_generate_negative_set_outdir Succeeded mb_generate_negative_set_prefix Succeeded mb_learn_mock Failed mb_mockinbird2table Succeeded mb_naive_bsfinder_output_table Succeeded mb_naive_bsfinder_pileup_file Succeeded mb_normalize_input_file Succeeded mb_normalize_normalization_pileup Succeeded mb_normalize_output_file Succeeded mb_pileup2sites Succeeded mb_plot_heatmap_gff Succeeded mb_plot_heatmap_outputdir Succeeded mb_plot_heatmap_parclip Succeeded mb_plot_heatmap_small_gff Succeeded mb_plot_heatmap_prefix Succeeded mb_plot_heatmap_small_outputdir Succeeded mb_plot_heatmap_small_parclip Succeeded mb_plot_heatmap_small_prefix Succeeded mb_plot_kmer_enrichment_genome Succeeded mb_plot_kmer_enrichment_outdir Succeeded mb_plot_kmer_enrichment_inputfile Succeeded mb_plot_kmer_enrichment_prefix Succeeded mb_plot_kmer_logodds_genome Succeeded mb_plot_kmer_logodds_negset Succeeded mb_plot_kmer_logodds_outdir Succeeded mb_plot_kmer_logodds_parclip Succeeded mb_plot_metagene_gff_file Succeeded mb_plot_metagene_nobs_gff Succeeded mb_plot_metagene_nobs_outputdir Succeeded mb_plot_metagene_nobs_parclip Succeeded mb_plot_metagene_nobs_prefix Succeeded mb_plot_metagene_outputdir Succeeded mb_plot_metagene_pc_table Succeeded mb_plot_metagene_prefix Succeeded mb_plot_transition_frequencies_inputfile Succeeded mb_plot_kmer_logodds_prefix Succeeded mb_plot_transition_frequencies_outdir Succeeded mb_plot_transition_frequencies_prefix Succeeded mb_postprocess_exist Succeeded mb_postprocess_output_dir Succeeded mb_postprocess_preprocess_dir Succeeded mb_preprocess_config_file Succeeded mb_preprocess_exist Succeeded mb_preprocess_output_dir Succeeded mb_preprocess_parclip_fastq Succeeded mb_remove_duplicates_output_fastq Succeeded mb_remove_duplicates_input_fastq Succeeded mb_site_merger Succeeded mb_softclip_analyzer_bam_file Succeeded mb_softclip_analyzer_output_dir Succeeded mb_table2fasta Succeeded mb_upgrade_table_output_file Succeeded mb_upgrade_table_table_file_table_file Succeeded mb_xxmotif Succeeded mockinbird_flip_mate_output_bam Succeeded mockinbird_postprocess_exist Succeeded mockinbird_postprocess_output_dir Succeeded mockinbird_postprocess_preprocess_dir Succeeded mockinbird_preprocess_config_file Succeeded mockinbird_preprocess_exist Succeeded mockinbird_preprocess_output_dir Succeeded mockinbird_preprocess_parclip_fastq Succeeded