snp-pipeline 2.2.0 96.67% Success

Executables

cfsan_snp_pipeline Succeeded alignSampleToReference Succeeded calculate_snp_distances Succeeded cfsan_snp_pipeline_call_consensus Succeeded cfsan_snp_pipeline_call_sites Succeeded cfsan_snp_pipeline_collect_metrics Succeeded cfsan_snp_pipeline_combine_metrics Succeeded cfsan_snp_pipeline_data Succeeded cfsan_snp_pipeline_distance Succeeded cfsan_snp_pipeline_filter_regions Succeeded cfsan_snp_pipeline_index_ref Succeeded cfsan_snp_pipeline_map_reads Succeeded cfsan_snp_pipeline_merge_sites Succeeded cfsan_snp_pipeline_merge_vcfs Succeeded cfsan_snp_pipeline_purge Succeeded cfsan_snp_pipeline_snp_matrix Succeeded cfsan_snp_pipeline_snp_reference Succeeded collectSampleMetrics Succeeded combineSampleMetrics Succeeded copy_snppipeline_data Succeeded create_snp_list Succeeded create_snp_matrix Succeeded create_snp_reference_seq Succeeded mergeVcf Succeeded prepReference Succeeded prepSamples Succeeded qarrayrun Failed run_snp_pipeline Succeeded snp_filter Succeeded call_consensus Succeeded