Command Line Interface¶
aclimatise¶
aclimatise [OPTIONS] COMMAND [ARGS]...
explore¶
Run an executable and explore all subcommands
aclimatise explore [OPTIONS] CMD...
Options
-
-c,--case<case>¶ Which case to use for variable names. If not set, defaults to the language defaults: snake_case for CWL and snake_case for WDL
- Options
snake|camel
-
-g,--generate-names¶ Rather than using the long flag to generate the argument name, generate them automatically using the flag description. Generally helpful if there are no long flags, only short flags.
-
-m,--man¶ Parse the help using its man page, rather than by executing the command. This will fail if the man page doesn’t exist
-
-d,--depth<depth>¶ How many levels of subcommands we should look for. Depth 2 means commands can be 3 levels deep, such as
git submodule foreach
-
-f,--format<formats>¶ The language in which to output the CLI wrapper
- Options
wdl|cwl|yml
-
-o,--out-dir<out_dir>¶ Directory in which to put the output files
-
-l,--help-flag<help_flag>¶ Flag to append to the end of the command to make it output help text
-
--subcommands,--no-subcommands¶ Look for subcommands
Arguments
-
CMD¶ Required argument(s)
pipe¶
Read a command help from stdin and output a tool definition to stdout
aclimatise pipe [OPTIONS] CMD...
Options
-
-g,--generate-names¶ Rather than using the long flag to generate the argument name, generate them automatically using the flag description. Generally helpful if there are no long flags, only short flags.
-
-c,--case<case>¶ Which case to use for variable names. If not set, defaults to the language defaults: snake_case for CWL and snake_case for WDL
- Options
snake|camel
-
-f,--format<format>¶ The language in which to output the CLI wrapper
- Options
wdl|cwl|yml|janis
Arguments
-
CMD¶ Required argument(s)